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  • Our recent paper: Asymmetric drug binding in an ATP-loaded inward-facing state of an ABC transporter
  • Mchaourab lab - Overview
  • Sampling the conformational landscapes of transporters and receptors with AlphaFold2
  • Modeling Alternate Conformations with Alphafold2
  • Our work in Science!
  • Molecular Basis of Genetic Diseases program highlights
Vanderbilt University
  • Our recent paper: Asymmetric drug binding in an ATP-loaded inward-facing state of an ABC transporter
  • Mchaourab lab - Overview
  • Sampling the conformational landscapes of transporters and receptors with AlphaFold2
  • Modeling Alternate Conformations with Alphafold2
  • Our work in Science!
  • Molecular Basis of Genetic Diseases program highlights
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  • Binding of destabilized betaB2-crystallin mutants to alpha-crystallin: the role of a folding interme…

    Binding of destabilized betaB2-crystallin mutants to alpha-crystallin: the role of a folding interme…

    Age-related changes in protein-protein interactions in the lens play a critical role in the temporal evolution of its optical properties. In the relatively non-regenerating environment of the fiber cells, a critical determinant of these interactions is partial or global unfolding as a consequence of post-translational modifications or chemical damage to… Read More

    Jul. 23, 2020

  • Mechanism of chaperone function in small heat-shock proteins. Fluorescence studies of the conformati…

    Mechanism of chaperone function in small heat-shock proteins. Fluorescence studies of the conformati…

    To further develop the mechanistic understanding of small heat-shock protein (sHSP) chaperone activity, we investigate the nature of the intermediate states recognized by alpha-crystallin and the conformations that are stably bound. The model substrates consist of a set of well characterized, destabilized T4 Lysozyme (T4L) mutants that have been shown… Read More

    Jul. 23, 2020

  • Structure of the substrate binding pocket of the multidrug transporter EmrE: site-directed spin labe…

    Structure of the substrate binding pocket of the multidrug transporter EmrE: site-directed spin labe…

    Site-directed spin labeling (SDSL) was used to explore the structural framework responsible for the obligatory drug-proton exchange in the Escherichia coli multidrug transporter, EmrE. For this purpose, a nitroxide scan was carried out along a stretch of 26 residues that include transmembrane segment 1 (TMS1). This segment has been implicated… Read More

    Jul. 23, 2020

  • Mechanism of chaperone function in small heat-shock proteins. Phosphorylation-induced activation of …

    Mechanism of chaperone function in small heat-shock proteins. Phosphorylation-induced activation of …

    The consequences of alphaB-crystallin phosphorylation on its chaperone activity were investigated using a detailed analysis of the recognition and binding of destabilized T4 lysozyme (T4L) mutants by alphaB-crystallin phosphorylation mimics containing combinations of serine to aspartate substitutions. The T4L site-directed mutants were selected to constitute an energetic ladder of progressively… Read More

    Jul. 23, 2020

  • Mechanism of chaperone function in small heat shock proteins. Two-mode binding of the excited states…

    Mechanism of chaperone function in small heat shock proteins. Two-mode binding of the excited states…

    To elucidate the mechanism of alphaA-crystallin chaperone function, a detailed thermodynamic analysis of its binding to destabilized, site-directed mutants of T4 lysozyme was carried out. The selected mutants form a ladder of stabilities spanning the 5-10 kcal/mol range of free energy of unfolding. The crystal structures of the majority of… Read More

    Jul. 23, 2020

  • The determinants of the oligomeric structure in Hsp16.5 are encoded in the alpha-crystallin domain.

    The determinants of the oligomeric structure in Hsp16.5 are encoded in the alpha-crystallin domain.

    The determinants of the oligomeric assembly of Hsp16.5, a small heat-shock protein (sHSP) from Methanococcus jannaschii, were explored via site-directed truncation and site-directed spin labeling. For this purpose, subunit contacts around the two-, three- and four-fold symmetry axes were fingerprinted using patterns of proximities between nitroxide spin labels introduced at… Read More

    Jul. 23, 2020

  • Protein structure determination using long-distance constraints from double-quantum coherence ESR: s…

    Protein structure determination using long-distance constraints from double-quantum coherence ESR: s…

    We report the use of a novel pulsed ESR technique for distance measurement, based on the detection of double quantum coherence (DQC), which yields high quality dipolar spectra, to significantly extend the range of measurable distances in proteins using nitroxide spin-labels. Eight T4 lysozyme (T4L) mutants, doubly labeled with methanethiosulfonate… Read More

    Jul. 23, 2020

  • Mapping proximity within proteins using fluorescence spectroscopy. A study of T4 lysozyme showing th…

    Mapping proximity within proteins using fluorescence spectroscopy. A study of T4 lysozyme showing th…

    We present a novel method for mapping proximity within proteins. The method exploits the quenching of the fluorescent label bimane by nearby Trp residues. In studies of T4 lysozyme we show that this effect appears to be distance dependent and orientation specific. Specifically, we show that a proximal Trp residue… Read More

    Jul. 23, 2020

  • The yeast mitochondrial citrate transport protein: determination of secondary structure and solvent …

    The yeast mitochondrial citrate transport protein: determination of secondary structure and solvent …

    To explore the spatial organization and functional dynamics of the citrate transport protein (CTP), a nitroxide scan was carried out along 22 consecutive residues within the fourth transmembrane domain (TMDIV). This domain has been implicated as being of unique importance to the CTP mechanism due to (i) the presence of… Read More

    Jul. 23, 2020

  • Small heat-shock protein structures reveal a continuum from symmetric to variable assemblies.

    Small heat-shock protein structures reveal a continuum from symmetric to variable assemblies.

    The small heat-shock proteins (sHSPs) form a diverse family of proteins that are produced in all organisms. They function as chaperone-like proteins in that they bind unfolded polypeptides and prevent uncontrolled protein aggregation. Here, we present parallel cryo-electron microscopy studies of five different sHSP assemblies: Methanococcus jannaschii HSP16.5, human alphaB-crystallin,… Read More

    Jul. 23, 2020

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Lab news

  • Our recent paper: Asymmetric drug binding in an ATP-loaded inward-facing state of an ABC transporter
  • Mchaourab lab – Overview
  • Sampling the conformational landscapes of transporters and receptors with AlphaFold2
  • Modeling Alternate Conformations with Alphafold2
  • Our work in Science!
  • Molecular Basis of Genetic Diseases program highlights

Hassane’s interview for the EPR newsletter

Molecular Basis of Genetic Diseases

Click here for Program website

https://lab.dev.vanderbilt.edu/mchaourab-lab/wp-content/uploads/sites/49/2020/02/MBGD_aboutvideo.mp4

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